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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849872.1_cds_XP_016510970.1_23756
CDS Infomation

[gene=LOC107828210] [db_xref=GeneID:107828210] [protein=interferon-related developmental regulator 2-like isoform X1] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016510970.1] [location=join(101792..101801,102651..102873,102994..103074,103809..103891,103995..104110,104196..104306,104474..104583,104867..105176,105261..105338,105412..105462,105553..105639,106098..>106176)] [gbkey=CDS]
Sequence

ATGGGTAGAAGCAAATGGAATTGGGAATTAAAGTGTTTGCTGGTGGATCTTTTTTTTTTC
CTCTTAGGAAGTTCGCAACGTAGGAGTGCTGCAATGCTGGATAGCGATGACACGGATAGC
GTTAGTTCATCGTCAACTACTCGGTCGGATATGATGTTGTCTGGTTTAGAGGAGGTTCAA
TTTGATAAGGAGACTGTCCTTGATCAGTGCGTGGACGCCCTTTATGAGAAAAGGGGCTCA
ACAAGAGAGAAGGCTTTGGCATCTATTATAGAAGCATTCAATAGTAACATACAGCATGAA
TTTGTTGAAAAGAAGTTTGCCACATTACTGCAACAATGTTTGAATTCCGTTAAACGTGGT
TCCTCCAAGGAGATAGCTTTGGCATCTCATGTTATTGGGCTTCTTGCTTTAACTGCTGGC
CCTGGGGACAAAGCACACGAGGTTCTGGAAGAATCAGTGTCACCTATCTCAGAGGCTCTT
AAATCTCGGTCTGATAATTCTAAAATATCCTCGCTACTGGAGTGTTTGGCCATTATTACC
TTTATTGGTGGCGAAGAACCGGAGAAAACAGAAAAGTCGATGCAATTGATGTGGCAAGTC
ATTCATCCAAAACTGGGTCCTAATGTTTCATCTGCTAAACCTTCACCAGCAATGATAACA
GCAGTTGTATCTTCTTGGTCTTTCCTCCTTACTACCATGGATGGATGGACACTTAACCCA
AAAAGTTGGCAAGGGTCAATCTCCTACTTCTCAACTCTTCTAGACAAGGAAGATCGATCT
GTGCGCATTGCAGCAGGCGAAGCACTTGCTTTAGTTTTTGAAGTTGGGAGTCTGGAAAAG
TTTTCTGGTGAAGCTAAAGGATCTAGTGACAGCTCCACAGATGAAGCTAACAAATCTAGG
GAATTATTACATATACAGGGATTAAGGGCAAAAGTCCTGAACCAGGTAAGAACCCTTTCG
GCAGAAGCTGGAGGTAAAGGATCAGCCAAGAAGGATCTTAACAACCAAAGAAACACATTT
CGAGATATATTGGAATTTCTCGAGGATGGGTATAGTCCTGAGGCCTCGACCAAGATTGGT
GGAGAACCGCTTAGCACAAGTACTTGGGCTCAACTTATACAGTTAAACTTCCTTAAGCAC
TTCCTTGGAGGAGGATTTGTGAAGCATATGCGGGAAAATGAGTTTCTTCATGATGTATTT
GGTTTCACGCCAAAGAAGAAATTGCCTGGTGTTGAGCACCGTGTATCCGGCGCTGAAAAG
AGATTGTTTAAGTCACCAAATTCAGAAAAAAACAAGGCCCGGACTCAATTTCTAAACAAG
CAAAGGATGATATCCCAGG

Peptide Sequence

PEP ID

XP_016510970.1
PEP Infomation

PREDICTED: interferon-related developmental regulator 2-like isoform X1 [Nicotiana tabacum]
Sequence

MGRSKWNWELKCLLVDLFFFLLGSSQRRSAAMLDSDDTDSVSSSSTTRSDMMLSGLEEVQ
FDKETVLDQCVDALYEKRGSTREKALASIIEAFNSNIQHEFVEKKFATLLQQCLNSVKRG
SSKEIALASHVIGLLALTAGPGDKAHEVLEESVSPISEALKSRSDNSKISSLLECLAIIT
FIGGEEPEKTEKSMQLMWQVIHPKLGPNVSSAKPSPAMITAVVSSWSFLLTTMDGWTLNP
KSWQGSISYFSTLLDKEDRSVRIAAGEALALVFEVGSLEKFSGEAKGSSDSSTDEANKSR
ELLHIQGLRAKVLNQVRTLSAEAGGKGSAKKDLNNQRNTFRDILEFLEDGYSPEASTKIG
GEPLSTSTWAQLIQLNFLKHFLGGGFVKHMRENEFLHDVFGFTPKKKLPGVEHRVSGAEK
RLFKSPNSEKNKARTQFLNKQRMISQDKNIGYYTSGGEF

Transcript Sequence

Gene sequence data has not been registered.